MolNFT v1 · #123696 · protein
Structural model of a protein alpha subunit in complex with GDP obtained with saxs and NMR residual couplings
5JS8 · Guanine nucleotide-binding protein G(I) subunit alpha-1: “Structural model of a protein alpha subunit in complex with GDP obtained with saxs and NMR residual couplings”. Solution nmr, 2 pockets (best druggability 0.61). MolNFT v1…
- PDB
- 5JS8
- Type
- protein
- Length
- 323 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Guanine nucleotide-binding protein G(I) subunit alpha-1
- UniProt
- P63096
- Pockets
- 2 · best druggability 0.61
Structure
solution nmr · 1 distinct chain · 52% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Guanine nucleotide-binding protein G(I) subunit alpha-1 | protein | 323 | 52% helix, 11% strand | P63096 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 482 | 0.61 | 0.75 | 49 | empty |
| 2 | 65 | 0.34 | 0.77 | 15 | empty |
Compared structures
- 5JS8 · Structural Model of a Protein alpha subunit in complex with GDP obtained with SAXS and… · the same entry in another collection · chain A against A, TM-score 1.00
- P63096 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I) subunit… · a predicted model of the same protein · chain A against A, TM-score 0.64
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P63096
- Elsewhere: RCSB PDB 5JS8 · PDBe 5JS8 · UniProt P63096
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