MolNFT v1 · #123688 · protein
Structure of the NS3 helicase from the french polynesia strain of the zika virus
5JRZ: “Structure of the NS3 helicase from the french polynesia strain of the zika virus”. X-ray diffraction, 1 ligand (POP), 3 pockets (best druggability 0.76). MolNFT v1 #123688 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 5JRZ
- Type
- protein
- Length
- 443 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Helicase
- Ligands
- POP
- Pockets
- 3 · best druggability 0.76
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Helicase | protein | 443 | 34% helix, 19% strand | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 962 | 0.76 | 0.79 | 83 | ACT |
| 2 | 128 | 0.56 | 0.83 | 25 | POP |
| 3 | 52 | 0.32 | 0.77 | 15 | empty |
Compared structures
- 5JRZ · Structure of the NS3 helicase from the French Polynesia strain of the Zika virus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5JRZ · PDBe 5JRZ
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