MolNFT v1 · #122523 · protein
Crystal structure of the proteasomal RPN13 pru-domain
5IRS · Proteasomal ubiquitin receptor ADRM1: “Crystal structure of the proteasomal RPN13 pru-domain”. X-ray diffraction. MolNFT v1 #122523 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5IRS
- Type
- protein
- Length
- 110 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Proteasomal ubiquitin receptor ADRM1
- UniProt
- Q16186
Structure
x-ray diffraction · 1 distinct chain · 12% helix, 49% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proteasomal ubiquitin receptor ADRM1 | protein | 110 | 12% helix, 49% strand | Q16186 |
Ligands and binding sites
- DTT · 2,3-dihydroxy-1,4-dithiobutane · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 covalent (additive adduct).
Compared structures
- 5IRS · crystal structure of the proteasomal Rpn13 PRU-domain · the same entry in another collection · chain A against A, TM-score 1.00
- Q16186 · AlphaFold monomer V2.0 prediction for proteasomal ubiquitin receptor ADRM1 (Q16186) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q16186
- Elsewhere: RCSB PDB 5IRS · PDBe 5IRS · UniProt Q16186
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