MolNFT v1 · #12218 · protein
SAP/SH2D1A bound to peptide N-Y-C
1KA7 · SH2 domain protein 1A: “SAP/SH2D1A bound to peptide N-Y-C”. Solution nmr. MolNFT v1 #12218 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1KA7
- Type
- protein
- Length
- 119 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- SH2 domain protein 1A; Peptide N-Y-C
- UniProt
- O60880, Q13291
Structure
solution nmr · 2 distinct chains · 14% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SH2 domain protein 1A | protein | 107 | 16% helix, 30% strand | O60880 |
| B | Peptide N-Y-C | protein | 12 | 0% helix, 17% strand | Q13291 |
Interfaces
1 interface between chains.
- A–B · 848 Ų buried · 6 hydrogen bonds · protein-protein
Compared structures
- 1KA7 · SAP/SH2D1A bound to peptide n-Y-c · the same entry in another collection · chain A against A, TM-score 1.00
- O60880 · AlphaFold monomer V2.0 prediction for SH2 domain-containing protein 1A (O60880) · a predicted model of the same protein · chain A against A, TM-score 0.90
- Q13291 · AlphaFold monomer V2.0 prediction for signaling lymphocytic activation molecule (Q13291) · a predicted model of the same protein · chain B against A, TM-score 0.30
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O60880
- Every structure of UniProt Q13291
- Elsewhere: RCSB PDB 1KA7 · PDBe 1KA7 · UniProt O60880 · UniProt Q13291
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