MolNFT v1 · #120793 · protein

Clpc N-terminal domain with bound phospho-arginine

5HBN · Negative regulator of genetic competence CLPC/MECB: “Clpc N-terminal domain with bound phospho-arginine”. X-ray diffraction, 2 ligands (RPI, SO4), 1 pocket (best druggability 0.27). MolNFT v1 #120793 on GenesisL1: 3D structure…

PDB: 5HBN
Type: protein
Length: 145 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Negative regulator of genetic competence CLPC/MECB
UniProt: P37571
Ligands: RPI, SO4
Pockets: 1 · best druggability 0.27

Structure

x-ray diffraction · 1 distinct chain · 66% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Negative regulator of genetic competence CLPC/MECB	protein	145	66% helix, 4% strand	P37571

Ligands and binding sites

RPI · phospho-arginine · ligand · 2 copies · chains A
SO4 · Sulfate ion · ion · 5 copies · chains A
ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	51	0.27	0.74	16	RPI

Compared structures

5HBN · ClpC N-terminal domain with bound phospho-arginine · the same entry in another collection · chain A against A, TM-score 1.00
P37571 · AlphaFold monomer V2.0 prediction for negative regulator of genetic competence CLPC/MECB… · a predicted model of the same protein · chain A against A, TM-score 0.94

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P37571
Elsewhere: RCSB PDB 5HBN · PDBe 5HBN · UniProt P37571

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.