MolNFT v1 · #111868 · protein
Crystal structure of the lectin domain of papg from E. COLI BI47 in complex with SSEA4 in space group P21
4Z3F · Papg, lectin domain: “Crystal structure of the lectin domain of papg from E. COLI BI47 in complex with SSEA4 in space group P21”. X-ray diffraction, 6 ligands (GAL, BGC, GLA). MolNFT v1 #111868 on GenesisL1: 3D structure, binding…
- PDB
- 4Z3F
- Type
- protein
- Length
- 197 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Papg, lectin domain
- UniProt
- T7DCJ2
- Ligands
- GAL, BGC, GLA, NGA, SIA, ZN
Structure
x-ray diffraction · 1 distinct chain · 2% helix, 57% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Papg, lectin domain | protein | 197 | 2% helix, 57% strand | T7DCJ2 |
Ligands and binding sites
- GAL · beta-D-galactopyranose · sugar · 2 copies · chains A
- BGC · beta-D-glucopyranose · sugar · chains A
- GLA · alpha-D-galactopyranose · sugar · chains A
- NGA · 2-acetamido-2-deoxy-beta-D-galactopyranose · sugar · chains A
- SIA · N-acetyl-alpha-neuraminic acid · sugar
- ZN · Zinc ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 4Z3F · Crystal structure of the lectin domain of PapG from E. coli BI47 in complex with SSEA4 in… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt T7DCJ2
- Elsewhere: RCSB PDB 4Z3F · PDBe 4Z3F · UniProt T7DCJ2
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