MolNFT v1 · #111684 · protein
Crystal structure of BRD9 bromodomain bound to a butyryllysine peptide
4YY6 · Bromodomain-containing protein 9: “Crystal structure of BRD9 bromodomain bound to a butyryllysine peptide”. X-ray diffraction. MolNFT v1 #111684 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4YY6
- Type
- protein
- Length
- 112 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Bromodomain-containing protein 9; Histone H4
- UniProt
- Q9H8M2, P62805
Structure
x-ray diffraction · 2 distinct chains · 56% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Bromodomain-containing protein 9 | protein | 102 | 62% helix, 0% strand | Q9H8M2 |
| Z | Histone H4 | protein | 10 | 0% helix, 0% strand | P62805 |
Interfaces
1 interface between chains.
- A–Z · 578 Ų buried · 7 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 modified (nonstandard).
Compared structures
- 4YY6 · Crystal structure of BRD9 Bromodomain bound to a butyryllysine peptide · the same entry in another collection · chain A against A, TM-score 1.00
- Q9H8M2 · AlphaFold monomer V2.0 prediction for bromodomain-containing protein 9 (Q9H8M2) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9H8M2
- Every structure of UniProt P62805
- Elsewhere: RCSB PDB 4YY6 · PDBe 4YY6 · UniProt Q9H8M2 · UniProt P62805
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