MolNFT v1 · #110200 · protein

Crystal structure of yeast N-terminal acetyltransferase nate (ppgpp) in complex with a bisubstrate

4XPD: “Crystal structure of yeast N-terminal acetyltransferase nate (ppgpp) in complex with a bisubstrate”. X-ray diffraction. MolNFT v1 #110200 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4XPD
Type: protein
Length: 1,122 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P12945, P07347, Q08689

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	774	—	P12945
B	—	protein	187	—	P07347
C	—	protein	155	—	Q08689
F	—	protein	6	—	—

Compared structures

4XPD · Crystal structure of yeast N-terminal acetyltransferase NatE (ppGpp) in complex with a… · the same entry in another collection · chain A against A, TM-score 1.00
P12945 · AlphaFold monomer V2.0 prediction for N-terminal acetyltransferase a complex subunit NAT1… · a predicted model of the same protein · chain A against A, TM-score 0.98
Q08689 · AlphaFold monomer V2.0 prediction for N-alpha-acetyltransferase NAT5 (Q08689) · a predicted model of the same protein · chain C against A, TM-score 0.98
P07347 · AlphaFold monomer V2.0 prediction for N-terminal acetyltransferase a complex catalytic… · a predicted model of the same protein · chain B against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P12945
Every structure of UniProt P07347
Every structure of UniProt Q08689
Elsewhere: RCSB PDB 4XPD · PDBe 4XPD · UniProt P12945 · UniProt P07347 · UniProt Q08689

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