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MolNFT v1 · #107868 · protein

Assembly principles of the unique cage formed by the ATPase rava hexamer and the lysine decarboxylase ldci decamer

4UPF · Lysine decarboxylase, inducible: “Assembly principles of the unique cage formed by the ATPase rava hexamer and the lysine decarboxylase ldci…”. Electron microscopy, 1 pocket (best druggability 0.41). MolNFT v1 #107868 on GenesisL1…

PDB
4UPF
Type
protein
Length
784 residues
Chains
2
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Lysine decarboxylase, inducible; ATPase rava
EC
4.1.1.18, 3.6.3.1
UniProt
P0A9H3, P31473
Pockets
1 · best druggability 0.41

Structure

electron microscopy · 2 distinct chains · 0% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ALysine decarboxylase, inducible (EC 4.1.1.18)protein7100% helix, 0% strandP0A9H3
DATPase rava (EC 3.6.3.1)protein740% helix, 0% strandP31473

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11360.410.7337empty

Compared structures

  • 4UPF · Assembly principles of the unique cage formed by the ATPase RavA hexamer and the lysine… · the same entry in another collection · chain A against A, TM-score 1.00
  • P0A9H3 · AlphaFold monomer V2.0 prediction for inducible lysine decarboxylase (P0A9H3) · a predicted model of the same protein · chain A against A, TM-score 0.98
  • P31473 · AlphaFold monomer V2.0 prediction for ATPase rava (P31473) · a predicted model of the same protein · chain D against A, TM-score 0.98

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