UniProt P0A9H3
Inducible lysine decarboxylase (P0A9H3)
Inducible lysine decarboxylase (UniProt P0A9H3), EC 4.1.1.18: 15 experimental structures and 1 predicted model on GenesisL1, 50 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P0A9H3
- Protein
- Inducible lysine decarboxylase
- EC
- 4.1.1.18
- Experimental structures
- 15
- Predicted models
- 1
- Pockets
- 50 · 3 records with a druggable one
Structures
16 records of P0A9H3 in the MolNFT archive: 15 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3N75 | X-ray Crystal Structure of the Escherichia coli Inducible Lysine Decarboxylase LdcI | x-ray diffraction | A, B, C, D, E | — | — |
| 3N75 | X-ray crystal structure of the escherichia COLI inducible lysine decarboxylase ldci | x-ray diffraction | A, B, C, D, E | — | — |
| 3Q16 | Linkage between the Bacterial Acid Stress and Stringent Responses: The Structure of the Inducible… | x-ray diffraction | A, B, C, D, E | — | — |
| 3Q16 | Linkage between the bacterial acid stress and stringent responses: the structure of the inducible… | x-ray diffraction | A, B, C, D, E | — | — |
| 4UPB | Electron cryo-microscopy of the complex formed between the hexameric ATPase RavA and the decameric… | electron microscopy | A, B | — | — |
| 4UPB | Electron cryo-microscopy of the complex formed between the hexameric ATPase rava and the decameric… | electron microscopy | A, B | — | — |
| 4UPF | Assembly principles of the unique cage formed by the ATPase RavA hexamer and the lysine… | electron microscopy | A | — | — |
| 4UPF | Assembly principles of the unique cage formed by the ATPase rava hexamer and the lysine… | electron microscopy | A | — | — |
| 5FKX | Structure of E.coli inducible lysine decarboxylase at active pH | electron microscopy | A | — | 10 (best 0.80) |
| 5FKX | Structure of E.COLI inducible lysine decarboxylase at active pH | electron microscopy | A | — | — |
| 5FL2 | Revisited cryo-EM structure of Inducible lysine decarboxylase complexed with LARA domain of RavA… | electron microscopy | A | — | — |
| 5FL2 | Revisited cryo-EM structure of inducible lysine decarboxylase complexed with lara domain of rava… | electron microscopy | A | — | — |
| 6YN5 | Inducible lysine decarboxylase LdcI decamer, pH 7.0 | electron microscopy | A, B, C, D, E, F, G, H, I, J | — | 20 (best 0.85) |
| 6YN5 | Inducible lysine decarboxylase ldci decamer, pH 7.0 | electron microscopy | A, B, C, D, E, F, G, H, I, J | — | — |
| 6YN6 | Inducible lysine decarboxylase LdcI stacks, pH 5.7 | electron microscopy | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T | — | 20 (best 0.85) |
| P0A9H3 | AlphaFold monomer V2.0 prediction for inducible lysine decarboxylase (P0A9H3) | predicted | A | — | — |
Experiment against prediction
- 6YN5 chain H against the predicted model P0A9H3: TM-score 1.00, RMSD 0.30 Å
- 6YN5 chain A against the predicted model P0A9H3: TM-score 1.00, RMSD 0.30 Å
- 6YN5 chain A against the predicted model P0A9H3: TM-score 1.00, RMSD 0.30 Å
- 6YN5 chain F against the predicted model P0A9H3: TM-score 1.00, RMSD 0.30 Å
- 6YN5 chain C against the predicted model P0A9H3: TM-score 1.00, RMSD 0.30 Å
- 6YN5 chain B against the predicted model P0A9H3: TM-score 1.00, RMSD 0.30 Å
- 6YN5 chain G against the predicted model P0A9H3: TM-score 1.00, RMSD 0.30 Å
- 3N75 chain A against the predicted model P0A9H3: TM-score 1.00, RMSD 0.31 Å
- 3N75 chain A against the predicted model P0A9H3: TM-score 1.00, RMSD 0.31 Å
- 6YN5 chain J against the predicted model P0A9H3: TM-score 1.00, RMSD 0.31 Å
Elsewhere
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