MolNFT v1 · #104341 · protein
Structure of NBD288 of TM287/288
4Q7L · Uncharacterized ABC transporter ATP-binding protein TM_0288: “Structure of NBD288 of TM287/288”. X-ray diffraction, 1 ligand (NI), 9 pockets (best druggability 0.53). MolNFT v1 #104341 on GenesisL1: 3D structure, binding sites and…
- PDB
- 4Q7L
- Type
- protein
- Length
- 742 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized ABC transporter ATP-binding protein TM_0288
- UniProt
- Q9WYC4
- Ligands
- NI
- Pockets
- 9 · best druggability 0.53
Structure
x-ray diffraction · 3 distinct chains · 37% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized ABC transporter ATP-binding protein TM_0288 | protein | 255 | 37% helix, 23% strand | Q9WYC4 |
| B | Uncharacterized ABC transporter ATP-binding protein TM_0288 | protein | 248 | 38% helix, 23% strand | Q9WYC4 |
| C | Uncharacterized ABC transporter ATP-binding protein TM_0288 | protein | 239 | 37% helix, 23% strand | Q9WYC4 |
Ligands and binding sites
- NI · Nickel (II) ion · metal · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 140 | 0.53 | 0.80 | 24 | empty |
| 2 | 251 | 0.51 | 0.75 | 29 | empty |
| 3 | 71 | 0.50 | 0.84 | 15 | empty |
| 4 | 158 | 0.48 | 0.77 | 21 | empty |
| 5 | 128 | 0.43 | 0.76 | 19 | empty |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9WYC4
- Elsewhere: RCSB PDB 4Q7L · PDBe 4Q7L · UniProt Q9WYC4
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