MolNFT v1 · #104172 · protein
Structure of the E. COLI yajr transporter yam domain combined iodine
4Q2M · Major facilitator superfamily MFS_1: “Structure of the E. COLI yajr transporter yam domain combined iodine”. X-ray diffraction, 2 ligands (CD, IOD). MolNFT v1 #104172 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4Q2M
- Type
- protein
- Length
- 62 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Major facilitator superfamily MFS_1
- UniProt
- C6EL42
- Ligands
- CD, IOD
Structure
x-ray diffraction · 1 distinct chain · 27% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Major facilitator superfamily MFS_1 | protein | 62 | 27% helix, 34% strand | C6EL42 |
Ligands and binding sites
- CD · Cadmium ion · metal · 2 copies · chains A
- IOD · Iodide ion · ion · 18 copies · chains A
- ACY · Acetic acid · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 4Q2M · Structure of the E. coli YajR Transporter YAM Domain Combined Iodine · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C6EL42
- Elsewhere: RCSB PDB 4Q2M · PDBe 4Q2M · UniProt C6EL42
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