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Ligand · ACY

ACY · Acetic acid

ACY, Acetic acid (C2 H4 O2, 60.0 g/mol), in the MolNFT structures on GenesisL1: bound in 337 records (233 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
ACY
Formula
C2 H4 O2
Class
additive
Structures
337
PDB entries
233

Binding sites

ACY in 337 structures; the first of them:

  • 1OCJ · Mutant D416A of the CELLOBIOHYDROLASE CEL6A FROM HUMICOLA INSOLENS in complex with a… · ACY A507 · binds VAL97, GLN98, LEU99, PRO133
  • 4YBB · High-resolution structure of the Escherichia coli ribosome · ACY DA3191 · binds U59, G60, U62, A74
  • 4YHV · Yeast Prp3 C-terminal fragment 325-469 · ACY A501 · binds ASN349, LYS351, ILE352, LYS355, ARG399, ILE400, LYS401, GLU404
  • 4Z47 · Structure of the enzyme-product complex resulting from TDG action on a GU mismatch in the… · ACY A404 · binds GLY138, ILE139, ASN140, TYR152, ASN157, ASN191
  • 4Z7B · Structure of the enzyme-product complex resulting from TDG action on a GfC mismatch · ACY A402 · binds GLY138, ILE139, ASN140, PRO141, TYR152, ASN157, ASN191
  • 4ZSO · Crystal structure of a complex between B7-H6, a tumor cell ligand for natural… · ACY E305 · binds SER30, TRP90, SER91, ARG106, VAL76, LYS77, PHE89
  • 5CYS · Structure of the enzyme-product complex resulting from TDG action on a GcaC mismatch · ACY A401 · binds GLY138, ILE139, ASN140, TYR152, ASN191
  • 5D5C · In meso in situ serial X-ray crystallography structure of lysozyme at 100 K · ACY A209 · binds LEU56, GLN57, ILE58, ASN59, TRP63, ILE98, ALA107, TRP108
  • 5D5F · In meso in situ serial X-ray crystallography structure of lysozyme by bromine-SAD at 100 K · ACY A209 · binds LEU56, GLN57, ILE58, ASN59, TRP63, ILE98, ALA107, TRP108
  • 5DDS · Crystal structure of aminotransferase CrmG from Actinoalloteichus sp. WH1-2216-6 in… · ACY D602 · binds ARG197, ALA229, LEU230, SER231, SER232, ARG197, ALA229, LEU230 and 2 more
  • 5DJO · Crystal structure of the CC1-FHA tandem of Kinesin-3 KIF13A · ACY B202 · binds GLY115, ASP116, ILE117, GLN139, LEU140, TRP141, LEU158
  • 5E2G · Crystal Structure of D-alanine Carboxypeptidase AmpC from Burkholderia cenocepacia · ACY A404 · binds LEU275, PRO276, LEU279
  • 5E5U · Crystal structure of the complex between Carbonic anhydrase-like domain of PTPRG and… · ACY B401 · binds PHE159, PRO163, LEU164, TYR165, ARG172
  • 5EIO · Crystal structure of LysY from Thermus thermophilus complexed with NADP+ and… · ACY A402 · binds PRO43, HIS45, LYS58
  • 5ERE · Extracellular ligand binding receptor from Desulfohalobium retbaense DSM5692 · ACY A603 · binds PRO490, ASP491, PHE492, PHE493, GLY494, ILE518, TYR519
  • 5EX0 · Crystal structure of human SMYD3 in complex with a MAP3K2 peptide · ACY A505 · binds ARG359, ARG369, LEU395
  • 5EX3 · Crystal structure of human SMYD3 in complex with a VEGFR1 peptide · ACY A505 · binds GLN160, ASP161
  • 5FL4 · Three dimensional structure of human carbonic anhydrase IX in complex with… · ACY A1260 · binds TRP97, GLY98, ALA99, ARG102, PRO115, LEU224, SER228
  • 5FNK · Native state mass spectrometry, surface plasmon resonance and X-ray crystallography… · ACY A1264 · binds PRO21, ILE22, LYS24, GLY25
  • 5G4E · S. enterica HisA mutant D10G, Dup13-15, Q24L, G102A, V106L · ACY A1248 · binds ALA97, ALA123

Residues it binds most

ARG 272, SER 196, GLU 215, TYR 223, GLY 190, ASP 188, THR 174, LEU 165, HIS 170, LYS 182 (residue and the binding sites it lines).

Found with

  • EDO · 1,2-ethanediol
  • CL · Chloride ion
  • GOL · Glycerol
  • CA · Calcium ion
  • ZN · Zinc ion
  • SO4 · Sulfate ion
  • NA · Sodium ion
  • PEG · Di(hydroxyethyl)ether
  • MG · Magnesium ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • FMT · Formic acid
  • GLC · alpha-D-glucopyranose

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