MolNFT v1 · #102840 · protein

Crystal structure of human P-cadherin EC1-EC2 in closed conformation

4OY9 · Cadherin-3: “Crystal structure of human P-cadherin EC1-EC2 in closed conformation”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #102840 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4OY9
Type: protein
Length: 213 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cadherin-3
UniProt: P22223
Ligands: CA

Structure

x-ray diffraction · 1 distinct chain · 3% helix, 44% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cadherin-3	protein	213	3% helix, 44% strand	P22223

Ligands and binding sites

CA · Calcium ion · metal · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

4OY9 · Crystal structure of human P-Cadherin EC1-EC2 in closed conformation · the same entry in another collection · chain A against A, TM-score 1.00
P22223 · AlphaFold monomer V2.0 prediction for cadherin-3 (P22223) · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P22223
Elsewhere: RCSB PDB 4OY9 · PDBe 4OY9 · UniProt P22223

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