MolNFT v1 · #532112 · protein

AlphaFold monomer V2.0 prediction for membrane protein insertase yidc (Q9X1H2)

Q9X1H2: “AlphaFold monomer V2.0 prediction for membrane protein insertase yidc (Q9X1H2)”. 6 pockets (best druggability 0.72). MolNFT v1 #532112 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q9X1H2
Type: protein
Length: 445 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xf87a97E0A4bB354D834857B14296240B167cbe70
Molecule: Membrane protein insertase yidc
UniProt: Q9X1H2
Pockets: 6 · best druggability 0.72

Structure

1 distinct chain · 45% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Membrane protein insertase yidc	protein	445	45% helix, 24% strand	Q9X1H2

Pockets

6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	710	0.72	0.78	47	empty
2	205	0.56	0.79	22	empty
3	218	0.53	0.76	24	empty
4	91	0.41	0.78	21	empty
5	57	0.36	0.79	15	empty

Compared structures

6Y86 · Active yidc insertase crystal structure with the first transmembrane domain resolved · an experimental structure of the same protein · chain A against A, TM-score 0.88
5Y83 · Crystal structure of yidc from thermotoga maritima · an experimental structure of the same protein · chain A against A, TM-score 0.75
5Y82 · Crystal structure of the periplasmic domain of the thermotoga maritima yidc · an experimental structure of the same protein · chain A against D, TM-score 0.45

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9X1H2
Elsewhere: UniProt Q9X1H2 · AlphaFold DB Q9X1H2

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