MolNFT v1 · #450991 · protein
AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (Q5HII6)
Q5HII6: “AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (Q5HII6)”. 1 pocket (best druggability 0.77). MolNFT v1 #450991 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5HII6
- Type
- protein
- Length
- 657 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- Methionine--tRNA ligase
- UniProt
- Q5HII6
- Pockets
- 1 · best druggability 0.77
Structure
1 distinct chain · 42% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methionine--tRNA ligase | protein | 657 | 42% helix, 20% strand | Q5HII6 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1087 | 0.77 | 0.79 | 77 | empty |
Compared structures
- 8XM3 · Methionyl-tRNA synthetase from Staphylococcus aureus complexed with a chlorhexidine… · an experimental structure of the same protein · chain A against A, TM-score 0.78
- 7WPI · Methionyl-tRNA synthetase from Staphylococcus aureus complexed with a phenylbenzimidazole… · an experimental structure of the same protein · chain A against A, TM-score 0.78
- 7WPI · Methionyl-tRNA synthetase from staphylococcus aureus complexed with a phenylbenzimidazole… · an experimental structure of the same protein · chain A against A, TM-score 0.78
- 8XM4 · Methionyl-tRNA synthetase from Staphylococcus aureus in complex with chlorhexidine and ATP · an experimental structure of the same protein · chain A against A, TM-score 0.78
- 7WPM · Methionyl-tRNA synthetase from Staphylococcus aureus complexed with a fragment and ATP · an experimental structure of the same protein · chain A against A, TM-score 0.78
- 7WPM · Methionyl-tRNA synthetase from staphylococcus aureus complexed with a fragment and ATP · an experimental structure of the same protein · chain A against A, TM-score 0.78
- 7WPX · Methionyl-tRNA synthetase from staphylococcus aureus complexed with a fragment and ATP · an experimental structure of the same protein · chain A against A, TM-score 0.77
- 7WPX · Methionyl-tRNA synthetase from Staphylococcus aureus complexed with a fragment and ATP · an experimental structure of the same protein · chain A against A, TM-score 0.77
- 7WQ0 · Methionyl-tRNA synthetase from Staphylococcus aureus complexed with a fragment and ATP · an experimental structure of the same protein · chain A against A, TM-score 0.77
- 7WQ0 · Methionyl-tRNA synthetase from staphylococcus aureus complexed with a fragment and ATP · an experimental structure of the same protein · chain A against A, TM-score 0.77
- 7WPK · Methionyl-tRNA synthetase from staphylococcus aureus complexed with L- met · an experimental structure of the same protein · chain A against A, TM-score 0.76
- 7WPK · Methionyl-tRNA synthetase from Staphylococcus aureus complexed with L-Met · an experimental structure of the same protein · chain A against A, TM-score 0.76
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5HII6
- Elsewhere: UniProt Q5HII6 · AlphaFold DB Q5HII6
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