MolNFT v1 · #446037 · protein
AlphaFold monomer V2.0 prediction for glutamate--tRNA ligase (Q8DLI5)
Q8DLI5: “AlphaFold monomer V2.0 prediction for glutamate--tRNA ligase (Q8DLI5)”. 3 pockets (best druggability 0.65). MolNFT v1 #446037 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8DLI5
- Type
- protein
- Length
- 485 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEa58c7534E5701aA8370E0fAEb19b7e14653e69c
- Molecule
- Glutamate--tRNA ligase
- UniProt
- Q8DLI5
- Pockets
- 3 · best druggability 0.65
Structure
1 distinct chain · 51% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glutamate--tRNA ligase | protein | 485 | 51% helix, 12% strand | Q8DLI5 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 298 | 0.65 | 0.81 | 35 | empty |
| 2 | 97 | 0.38 | 0.76 | 21 | empty |
| 3 | 52 | 0.26 | 0.73 | 16 | empty |
Compared structures
- 2CFO · Non-Discriminating Glutamyl-tRNA Synthetase from Thermosynechococcus elongatus in Complex… · an experimental structure of the same protein · chain A against B, TM-score 0.98
- 2CFO · Non-discriminating glutamyl-tRNA synthetase from thermosynechococcus elongatus in complex… · an experimental structure of the same protein · chain A against B, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8DLI5
- Elsewhere: UniProt Q8DLI5 · AlphaFold DB Q8DLI5
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