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AlphaFold monomer V2.0 prediction for glutamate--tRNA ligase (Q8DLI5)

Analyse AlphaFold monomer V2.0 prediction for glutamate--tRNA ligase (Q8DLI5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q8DLI5
Type: protein
Length: 485 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xEa58c7534E5701aA8370E0fAEb19b7e14653e69c
Molecule: Glutamate--tRNA ligase
UniProt: Q8DLI5
Pockets: 3 · best druggability 0.65

Structure

1 distinct chain · 51% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Glutamate--tRNA ligase	protein	485	51% helix, 12% strand	Q8DLI5

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	298	0.65	0.81	35	empty
2	97	0.38	0.76	21	empty
3	52	0.26	0.73	16	empty

Compared structures

2CFO · Non-Discriminating Glutamyl-tRNA Synthetase from Thermosynechococcus elongatus in Complex… · an experimental structure of the same protein · chain A against B, TM-score 0.98
2CFO · Non-discriminating glutamyl-tRNA synthetase from thermosynechococcus elongatus in complex… · an experimental structure of the same protein · chain A against B, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8DLI5
Elsewhere: UniProt Q8DLI5 · AlphaFold DB Q8DLI5

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