MolNFT v1 · #439625 · protein
AlphaFold monomer V2.0 prediction for stimulator of interferon genes protein (Q86WV6)
Q86WV6: “AlphaFold monomer V2.0 prediction for stimulator of interferon genes protein (Q86WV6)”. 4 pockets (best druggability 0.39). MolNFT v1 #439625 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q86WV6
- Type
- protein
- Length
- 379 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1Fbc4334c6ACf0E9Cee9C8366EAB84F4575214B6
- Molecule
- Stimulator of interferon genes protein
- UniProt
- Q86WV6
- Pockets
- 4 · best druggability 0.39
Structure
1 distinct chain · 54% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Stimulator of interferon genes protein | protein | 379 | 54% helix, 12% strand | Q86WV6 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 133 | 0.39 | 0.74 | 18 | empty |
| 2 | 83 | 0.34 | 0.74 | 14 | empty |
| 3 | 70 | 0.29 | 0.73 | 16 | empty |
| 4 | 60 | 0.28 | 0.74 | 13 | empty |
Compared structures
- 8GSZ · Structure of STING SAVI-related mutant V147L · an experimental structure of the same protein · chain A against B, TM-score 0.79
- 7SII · Human sting bound to both cgamp and 1-[(2-chloro-6-fluorophenyl)… · an experimental structure of the same protein · chain A against A, TM-score 0.50
- 4F5D · ERIS/STING in complex with ligand · an experimental structure of the same protein · chain A against A, TM-score 0.48
- 4F5D · ERIS/STING in complex with ligand · an experimental structure of the same protein · chain A against A, TM-score 0.48
- 8A2K · human STING in complex with 2'-3'-cyclic-GMP-7-deaza(4-[(2-naphthyloxy)methyl]phenyl)-AMP · an experimental structure of the same protein · chain A against A, TM-score 0.47
- 4F5W · Crystal structure of ligand free human sting ctd · an experimental structure of the same protein · chain A against A, TM-score 0.47
- 4F5W · Crystal structure of ligand free human STING CTD · an experimental structure of the same protein · chain A against A, TM-score 0.47
- 4F5Y · Crystal structure of human sting ctd complex with C-di-gmp · an experimental structure of the same protein · chain A against A, TM-score 0.47
- 4F5Y · Crystal structure of human STING CTD complex with C-di-GMP · an experimental structure of the same protein · chain A against A, TM-score 0.47
- 8A2J · human STING in complex with 2'-3'-cyclic-GMP-7-deaza(4-biphenylyl)-AMP · an experimental structure of the same protein · chain A against A, TM-score 0.47
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q86WV6
- Elsewhere: UniProt Q86WV6 · AlphaFold DB Q86WV6
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