MolNFT v1 · #422187 · protein
AlphaFold monomer V2.0 prediction for type 3 secretion system secretin (Q04641)
Q04641: “AlphaFold monomer V2.0 prediction for type 3 secretion system secretin (Q04641)”. 2 pockets (best druggability 0.39). MolNFT v1 #422187 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q04641
- Type
- protein
- Length
- 566 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xE83049713370f9cea2d2CDB16Db5b485De523e3A
- Molecule
- Type 3 secretion system secretin
- UniProt
- Q04641
- Pockets
- 2 · best druggability 0.39
Structure
1 distinct chain · 22% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Type 3 secretion system secretin | protein | 566 | 22% helix, 39% strand | Q04641 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 94 | 0.39 | 0.76 | 20 | empty |
| 2 | 73 | 0.33 | 0.75 | 15 | empty |
Compared structures
- 8AXN · Inner membrane ring and secretin N0 N1 domains of the type 3 secretion system of Shigella… · an experimental structure of the same protein · chain A against y, TM-score 0.24
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q04641
- Elsewhere: UniProt Q04641 · AlphaFold DB Q04641
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