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AlphaFold monomer V2.0 prediction for type 3 secretion system secretin (Q04641)

Analyse AlphaFold monomer V2.0 prediction for type 3 secretion system secretin (Q04641) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q04641
Type: protein
Length: 566 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xE83049713370f9cea2d2CDB16Db5b485De523e3A
Molecule: Type 3 secretion system secretin
UniProt: Q04641
Pockets: 2 · best druggability 0.39

Structure

1 distinct chain · 22% helix, 39% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Type 3 secretion system secretin	protein	566	22% helix, 39% strand	Q04641

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	94	0.39	0.76	20	empty
2	73	0.33	0.75	15	empty

Compared structures

8AXL · Outer membrane secretin pore of the type 3 secretion system of Shigella flexneri · an experimental structure of the same protein · chain A against F, TM-score 0.45

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q04641
Elsewhere: UniProt Q04641 · AlphaFold DB Q04641

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