MolNFT v1 · #411454 · protein

AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase a (Q3JVW6)

Q3JVW6: “AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase a (Q3JVW6)”. 2 pockets (best druggability 0.74). MolNFT v1 #411454 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q3JVW6
Type: protein
Length: 275 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xB44F19a0cb161828322eEEd13F55d4C3C34938d2
Molecule: Ribosomal RNA small subunit methyltransferase a
UniProt: Q3JVW6
Pockets: 2 · best druggability 0.74

Structure

1 distinct chain · 40% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ribosomal RNA small subunit methyltransferase a	protein	275	40% helix, 21% strand	Q3JVW6

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	167	0.74	0.91	38	empty
2	64	0.28	0.73	14	empty

Compared structures

3UZU · The structure of the Ribosomal RNA small subunit methyltransferase A from Burkholderia… · an experimental structure of the same protein · chain A against A, TM-score 0.91
3UZU · The structure of the ribosomal RNA small subunit methyltransferase a from burkholderia… · an experimental structure of the same protein · chain A against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q3JVW6
Elsewhere: UniProt Q3JVW6 · AlphaFold DB Q3JVW6

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