AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit L (Q8U4N1)

Structure

1 distinct chain · 42% helix, 29% strand (DSSP).

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Compared structures

• 8RBO · Cryo-EM structure of Pyrococcus furiosus apo form RNA polymerase contracted clamp… · an experimental structure of the same protein · chain A against L, TM-score 0.98
• 8P2I · Cryo-EM structure of Pyrococcus furiosus apo form RNA polymerase contracted clamp… · an experimental structure of the same protein · chain A against L, TM-score 0.98
• 8CRO · Cryo-EM structure of Pyrococcus furiosus transcription elongation complex · an experimental structure of the same protein · chain A against L, TM-score 0.97
• 8ORQ · Cryo-EM structure of Pyrococcus furiosus apo form RNA polymerase open clamp conformation · an experimental structure of the same protein · chain A against L, TM-score 0.97
• 8OKI · Cryo-EM structure of Pyrococcus furiosus transcription elongation complex bound to Spt4/5 · an experimental structure of the same protein · chain A against L, TM-score 0.96

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q8U4N1
• Elsewhere: UniProt Q8U4N1 · AlphaFold DB Q8U4N1