MolNFT v1 · #299412 · protein
AlphaFold monomer V2.0 prediction for L-prolyl-[peptidyl-carrier protein] dehydrogenase (Q5W271)
Q5W271: “AlphaFold monomer V2.0 prediction for L-prolyl-[peptidyl-carrier protein] dehydrogenase (Q5W271)”. 3 pockets (best druggability 0.71). MolNFT v1 #299412 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q5W271
- Type
- protein
- Length
- 386 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- L-prolyl-[peptidyl-carrier protein] dehydrogenase
- UniProt
- Q5W271
- Pockets
- 3 · best druggability 0.71
Structure
1 distinct chain · 58% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | L-prolyl-[peptidyl-carrier protein] dehydrogenase | protein | 386 | 58% helix, 15% strand | Q5W271 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 453 | 0.71 | 0.81 | 46 | empty |
| 2 | 96 | 0.60 | 0.87 | 15 | empty |
| 3 | 102 | 0.38 | 0.75 | 13 | empty |
Compared structures
- 6AF6 · Piga with FAD and proline · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 6AF6 · PigA with FAD and proline · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 5ZW7 · FAD-piga complex at 1.3 a · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 5ZW2 · FAD complex of piga · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 5ZW8 · Piga with FAD and proline · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 5ZW8 · PigA with FAD and proline · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 5ZW0 · Apo-form piga · an experimental structure of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5W271
- Elsewhere: UniProt Q5W271 · AlphaFold DB Q5W271
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