MolNFT v1 · #283884 · protein
AlphaFold monomer V2.0 prediction for otu domain-containing protein 7B (Q6GQQ9)
Q6GQQ9: “AlphaFold monomer V2.0 prediction for otu domain-containing protein 7B (Q6GQQ9)”. 6 pockets (best druggability 0.74). MolNFT v1 #283884 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q6GQQ9
- Type
- protein
- Length
- 843 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB1F9f6f3e842952AC4115b59A6e6F9EF45a0C86d
- Molecule
- Otu domain-containing protein 7B
- UniProt
- Q6GQQ9
- Pockets
- 6 · best druggability 0.74
Structure
1 distinct chain · 28% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Otu domain-containing protein 7B | protein | 843 | 28% helix, 7% strand | Q6GQQ9 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 872 | 0.74 | 0.78 | 94 | empty |
| 2 | 309 | 0.58 | 0.77 | 28 | empty |
| 3 | 67 | 0.44 | 0.82 | 22 | empty |
| 4 | 51 | 0.33 | 0.78 | 14 | empty |
| 5 | 62 | 0.28 | 0.73 | 10 | empty |
Compared structures
- 5LRV · Structure of CEZANNE/OTUD7B otu domain bound to LYS11-linked diubiquitin · an experimental structure of the same protein · chain A against A, TM-score 0.31
- 5LRV · Structure of Cezanne/OTUD7B OTU domain bound to Lys11-linked diubiquitin · an experimental structure of the same protein · chain A against A, TM-score 0.31
- 5LRU · Structure of Cezanne/OTUD7B OTU domain · an experimental structure of the same protein · chain A against A, TM-score 0.30
- 5LRU · Structure of CEZANNE/OTUD7B otu domain · an experimental structure of the same protein · chain A against A, TM-score 0.30
- 5LRW · Structure of Cezanne/OTUD7B OTU domain bound to ubiquitin · an experimental structure of the same protein · chain A against C, TM-score 0.29
- 5LRW · Structure of CEZANNE/OTUD7B otu domain bound to ubiquitin · an experimental structure of the same protein · chain A against C, TM-score 0.29
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6GQQ9
- Elsewhere: UniProt Q6GQQ9 · AlphaFold DB Q6GQQ9
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