MolNFT v1 · #277424 · protein
AlphaFold monomer V2.0 prediction for nuclear pore complex protein NUP85 (Q9BW27)
Q9BW27: “AlphaFold monomer V2.0 prediction for nuclear pore complex protein NUP85 (Q9BW27)”. 4 pockets (best druggability 0.54). MolNFT v1 #277424 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9BW27
- Type
- protein
- Length
- 656 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- Nuclear pore complex protein NUP85
- UniProt
- Q9BW27
- Pockets
- 4 · best druggability 0.54
Structure
1 distinct chain · 67% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nuclear pore complex protein NUP85 | protein | 656 | 67% helix, 1% strand | Q9BW27 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 156 | 0.54 | 0.80 | 25 | empty |
| 2 | 71 | 0.52 | 0.85 | 18 | empty |
| 3 | 91 | 0.34 | 0.74 | 19 | empty |
| 4 | 84 | 0.32 | 0.73 | 11 | empty |
Compared structures
- 7PEQ · Model of the outer rings of the human nuclear pore complex · an experimental structure of the same protein · chain A against AH, TM-score 0.63
- 5A9Q · Human nuclear pore complex · an experimental structure of the same protein · chain A against 8, TM-score 0.54
- 5A9Q · Human nuclear pore complex · an experimental structure of the same protein · chain A against 8, TM-score 0.54
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BW27
- Elsewhere: UniProt Q9BW27 · AlphaFold DB Q9BW27
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