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MolNFT v1 · #269023 · protein

AlphaFold monomer V2.0 prediction for oxysterols receptor lxr-beta (P55055)

P55055: “AlphaFold monomer V2.0 prediction for oxysterols receptor lxr-beta (P55055)”. 4 pockets (best druggability 0.85). MolNFT v1 #269023 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession
P55055
Type
protein
Length
460 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0x9a7859522C8b5BAa3f909CfabcF4eC23854808F5
Molecule
Oxysterols receptor lxr-beta
UniProt
P55055
Pockets
4 · best druggability 0.85

Structure

1 distinct chain · 47% helix, 4% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AOxysterols receptor lxr-betaprotein46047% helix, 4% strandP55055

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12110.850.9726empty
21750.410.7322empty
3700.360.7817empty
4580.310.7515empty

Compared structures

  • 5I4V · Discovery of novel, orally efficacious Liver X Receptor (LXR) beta agonists · an experimental structure of the same protein · chain A against A, TM-score 0.52
  • 5I4V · Discovery of novel, orally efficacious liver X receptor (lxr) beta agonists · an experimental structure of the same protein · chain A against A, TM-score 0.52
  • 3L0E · X-ray crystal structure of a potent liver X receptor modulator · an experimental structure of the same protein · chain A against A, TM-score 0.52
  • 3L0E · X-ray crystal structure of a Potent Liver X Receptor Modulator · an experimental structure of the same protein · chain A against A, TM-score 0.52
  • 1PQ6 · Human lxr beta hormone receptor / GW3965 complex · an experimental structure of the same protein · chain A against B, TM-score 0.52
  • 1PQ6 · Human lxr beta hormone receptor / GW3965 complex · an experimental structure of the same protein · chain A against B, TM-score 0.52
  • 5KYA · Brain penetrant liver X receptor (lxr) modulators based on a 2,4,5,6… · an experimental structure of the same protein · chain A against E, TM-score 0.52
  • 5HJP · Identification of lxrbeta selective agonists for the treatment of ALZHEIMER'S disease · an experimental structure of the same protein · chain A against B, TM-score 0.52
  • 5KYJ · Brain penetrant liver X receptor (LXR) modulators based on a… · an experimental structure of the same protein · chain A against A, TM-score 0.52
  • 5KYJ · Brain penetrant liver X receptor (lxr) modulators based on a 2,4,5,6… · an experimental structure of the same protein · chain A against A, TM-score 0.52
  • 6K9G · Human lxr-beta in complex with an agonist · an experimental structure of the same protein · chain A against A, TM-score 0.52
  • 1P8D · X-Ray Crystal Structure of LXR Ligand Binding Domain with 24(S),25-epoxycholesterol · an experimental structure of the same protein · chain A against B, TM-score 0.51

Analyse

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