MolNFT v1 · #268514 · protein
AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit 6 (Q56218)
Q56218: “AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit 6 (Q56218)”. 1 pocket (best druggability 0.35). MolNFT v1 #268514 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q56218
- Type
- protein
- Length
- 181 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7012c0b45c68a2c067644b9d3e5DDa06892c6957
- Molecule
- NADH-quinone oxidoreductase subunit 6
- UniProt
- Q56218
- Pockets
- 1 · best druggability 0.35
Structure
1 distinct chain · 41% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-quinone oxidoreductase subunit 6 | protein | 181 | 41% helix, 12% strand | Q56218 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 95 | 0.35 | 0.74 | 15 | empty |
Compared structures
- 6I0D · Respiratory complex I from thermus thermophilus with bound decyl- ubiquinone · an experimental structure of the same protein · chain A against 6, TM-score 0.84
- 6I0D · Respiratory complex I from Thermus thermophilus with bound Decyl-Ubiqui · an experimental structure of the same protein · chain A against 6, TM-score 0.84
- 6Q8W · Respiratory complex I from Thermus thermophilus with bound Aureothin. · an experimental structure of the same protein · chain A against 6, TM-score 0.84
- 6Q8W · Respiratory complex I from thermus thermophilus with bound aureothin. · an experimental structure of the same protein · chain A against 6, TM-score 0.84
- 6Y11 · Respiratory complex I from Thermus thermophilus · an experimental structure of the same protein · chain A against 6, TM-score 0.84
- 6Y11 · Respiratory complex I from thermus thermophilus · an experimental structure of the same protein · chain A against 6, TM-score 0.84
- 6Q8O · Respiratory complex I from Thermus thermophilus with bound Piericidin A · an experimental structure of the same protein · chain A against G, TM-score 0.84
- 6Q8X · Respiratory complex I from Thermus thermophilus with bound Pyridaben. · an experimental structure of the same protein · chain A against G, TM-score 0.83
- 6Q8X · Respiratory complex I from thermus thermophilus with bound pyridaben. · an experimental structure of the same protein · chain A against 6, TM-score 0.83
- 6I1P · Respiratory complex I from thermus thermophilus with bound NADH · an experimental structure of the same protein · chain A against 6, TM-score 0.83
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q56218
- Elsewhere: UniProt Q56218 · AlphaFold DB Q56218
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