MolNFT v1 · #267851 · protein

AlphaFold monomer V2.0 prediction for nucleosome assembly protein 1-like 1 (P55209)

P55209: “AlphaFold monomer V2.0 prediction for nucleosome assembly protein 1-like 1 (P55209)”. 5 pockets (best druggability 0.47). MolNFT v1 #267851 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P55209
Type: protein
Length: 391 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
Molecule: Nucleosome assembly protein 1-like 1
UniProt: P55209
Pockets: 5 · best druggability 0.47

Structure

1 distinct chain · 39% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Nucleosome assembly protein 1-like 1	protein	391	39% helix, 13% strand	P55209

Pockets

5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	124	0.47	0.78	21	empty
2	112	0.40	0.76	15	empty
3	93	0.39	0.77	16	empty
4	54	0.34	0.78	15	empty
5	57	0.27	0.73	12	empty

Compared structures

7UN6 · Complex of UBE2O with NAP1L1 · an experimental structure of the same protein · chain A against B, TM-score 0.60
7UN3 · Complex of UBE2O with NAP1L1 and ubiquitylated UL2 · an experimental structure of the same protein · chain A against C, TM-score 0.54

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P55209
Elsewhere: UniProt P55209 · AlphaFold DB P55209

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