Research workbench
AlphaFold monomer V2.0 prediction for nucleosome assembly protein 1-like 1 (P55209)
Analyse AlphaFold monomer V2.0 prediction for nucleosome assembly protein 1-like 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P55209
- Type
- protein
- Length
- 391 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
- Molecule
- Nucleosome assembly protein 1-like 1
- UniProt
- P55209
- Pockets
- 5 · best druggability 0.47
Structure
1 distinct chain · 39% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleosome assembly protein 1-like 1 | protein | 391 | 39% helix, 13% strand | P55209 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 124 | 0.47 | 0.78 | 21 | empty |
| 2 | 112 | 0.40 | 0.76 | 15 | empty |
| 3 | 93 | 0.39 | 0.77 | 16 | empty |
| 4 | 54 | 0.34 | 0.78 | 15 | empty |
| 5 | 57 | 0.27 | 0.73 | 12 | empty |
Compared structures
- 7UN6 · Complex of UBE2O with NAP1L1 · an experimental structure of the same protein · chain A against B, TM-score 0.60
- 7UN6 · Complex of UBE2O with NAP1L1 · an experimental structure of the same protein · chain A against B, TM-score 0.60
- 7UN3 · Complex of UBE2O with NAP1L1 and ubiquitylated UL2 · an experimental structure of the same protein · chain A against C, TM-score 0.54
- 7UN3 · Complex of UBE2O with NAP1L1 and ubiquitylated uL2 · an experimental structure of the same protein · chain A against C, TM-score 0.54
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55209
- Elsewhere: UniProt P55209 · AlphaFold DB P55209
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