MolNFT v1 · #262578 · protein
AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Q9CQJ8)
Q9CQJ8: “AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Q9CQJ8)”. 2 pockets (best druggability 0.64). MolNFT v1 #262578 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9CQJ8
- Type
- protein
- Length
- 179 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9
- UniProt
- Q9CQJ8
- Pockets
- 2 · best druggability 0.64
Structure
1 distinct chain · 55% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 | protein | 179 | 55% helix, 0% strand | Q9CQJ8 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 332 | 0.64 | 0.79 | 31 | empty |
| 2 | 129 | 0.38 | 0.73 | 21 | empty |
Compared structures
- 8RGR · Closed Complex I from murine liver · an experimental structure of the same protein · chain A against n, TM-score 0.96
- 8PW6 · C respirasome from murine liver · an experimental structure of the same protein · chain A against n1, TM-score 0.96
- 7B93 · Cryo-EM structure of mitochondrial complex I from mus musculus inhibited by iacs-2858 at… · an experimental structure of the same protein · chain A against n, TM-score 0.96
- 8IAQ · Respiratory complex Membrane domain of CI, focused map of type I, Wild type mouse under… · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 8IBD · Respiratory complex CI:CIII2, type II, Wild type mouse under cold temperature · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 8IC4 · Respiratory complex Membrane domain of CI, focus-refined of type I, PERK -/- mouse under… · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 6ZR2 · Cryo-EM structure of respiratory complex I in the active state from mus musculus at 3.1 a · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 6ZTQ · Cryo-EM structure of respiratory complex I from mus musculus inhibited by piericidin a at… · an experimental structure of the same protein · chain A against n, TM-score 0.95
- 7AK5 · Cryo-EM structure of respiratory complex I in the deactive state from mus musculus at 3.2… · an experimental structure of the same protein · chain A against n, TM-score 0.94
- 7AK5 · Cryo-EM structure of respiratory complex I in the deactive state from Mus musculus at 3.2… · an experimental structure of the same protein · chain A against n, TM-score 0.94
- 7AK6 · Cryo-EM structure of ND6-P25L mutant respiratory complex I from mus musculus at 3.8 a · an experimental structure of the same protein · chain A against n, TM-score 0.94
- 6G2J · Mouse mitochondrial complex I in the active state · an experimental structure of the same protein · chain A against n, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9CQJ8
- Elsewhere: UniProt Q9CQJ8 · AlphaFold DB Q9CQJ8
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