Research workbench
AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Q9CQJ8)
Analyse AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9CQJ8
- Type
- protein
- Length
- 179 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9
- UniProt
- Q9CQJ8
- Pockets
- 2 · best druggability 0.64
Structure
1 distinct chain · 55% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 | protein | 179 | 55% helix, 0% strand | Q9CQJ8 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 332 | 0.64 | 0.79 | 31 | empty |
| 2 | 129 | 0.38 | 0.73 | 21 | empty |
Compared structures
- 8RGQ · Open Complex I from murine liver · an experimental structure of the same protein · chain A against n, TM-score 0.96
- 8RGR · Closed Complex I from murine liver · an experimental structure of the same protein · chain A against n, TM-score 0.96
- 8PW5 · CS respirasome from murine liver · an experimental structure of the same protein · chain A against n1, TM-score 0.96
- 8PW7 · A respirasome from murine liver · an experimental structure of the same protein · chain A against n1, TM-score 0.96
- 8PW6 · C respirasome from murine liver · an experimental structure of the same protein · chain A against n1, TM-score 0.96
- 8RGT · Open Complex I from murine brain · an experimental structure of the same protein · chain A against n, TM-score 0.96
- 8OM1 · Mitochondrial complex I from Mus musculus in the active state · an experimental structure of the same protein · chain A against n, TM-score 0.96
- 8RGP · Closed Complex I from murine brain · an experimental structure of the same protein · chain A against n, TM-score 0.96
- 8OLT · Mitochondrial complex I from Mus musculus in the active state bound with piericidin A · an experimental structure of the same protein · chain A against n, TM-score 0.96
- 8CA3 · Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 2). · an experimental structure of the same protein · chain A against n, TM-score 0.96
- 7B93 · Cryo-EM structure of mitochondrial complex I from Mus musculus inhibited by IACS-2858 at… · an experimental structure of the same protein · chain A against n, TM-score 0.96
- 7B93 · Cryo-EM structure of mitochondrial complex I from mus musculus inhibited by iacs-2858 at… · an experimental structure of the same protein · chain A against n, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9CQJ8
- Elsewhere: UniProt Q9CQJ8 · AlphaFold DB Q9CQJ8
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.