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AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Q9CQJ8)

Analyse AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
Q9CQJ8
Type
protein
Length
179 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
Molecule
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9
UniProt
Q9CQJ8
Pockets
2 · best druggability 0.64

Structure

1 distinct chain · 55% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ANADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9protein17955% helix, 0% strandQ9CQJ8

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
13320.640.7931empty
21290.380.7321empty

Compared structures

  • 8RGQ · Open Complex I from murine liver · an experimental structure of the same protein · chain A against n, TM-score 0.96
  • 8RGR · Closed Complex I from murine liver · an experimental structure of the same protein · chain A against n, TM-score 0.96
  • 8PW5 · CS respirasome from murine liver · an experimental structure of the same protein · chain A against n1, TM-score 0.96
  • 8PW7 · A respirasome from murine liver · an experimental structure of the same protein · chain A against n1, TM-score 0.96
  • 8PW6 · C respirasome from murine liver · an experimental structure of the same protein · chain A against n1, TM-score 0.96
  • 8RGT · Open Complex I from murine brain · an experimental structure of the same protein · chain A against n, TM-score 0.96
  • 8OM1 · Mitochondrial complex I from Mus musculus in the active state · an experimental structure of the same protein · chain A against n, TM-score 0.96
  • 8RGP · Closed Complex I from murine brain · an experimental structure of the same protein · chain A against n, TM-score 0.96
  • 8OLT · Mitochondrial complex I from Mus musculus in the active state bound with piericidin A · an experimental structure of the same protein · chain A against n, TM-score 0.96
  • 8CA3 · Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 2). · an experimental structure of the same protein · chain A against n, TM-score 0.96
  • 7B93 · Cryo-EM structure of mitochondrial complex I from Mus musculus inhibited by IACS-2858 at… · an experimental structure of the same protein · chain A against n, TM-score 0.96
  • 7B93 · Cryo-EM structure of mitochondrial complex I from mus musculus inhibited by iacs-2858 at… · an experimental structure of the same protein · chain A against n, TM-score 0.96

Analyse

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