MolNFT v1 · #261390 · protein
AlphaFold monomer V2.0 prediction for NAD(P)H-quinone oxidoreductase subunit O (Q8DMU4)
Q8DMU4: “AlphaFold monomer V2.0 prediction for NAD(P)H-quinone oxidoreductase subunit O (Q8DMU4)”. 1 pocket (best druggability 0.33). MolNFT v1 #261390 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8DMU4
- Type
- protein
- Length
- 70 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0fF583881C149817cdC6D4DEB7c1508b0a6547C7
- Molecule
- NAD(P)H-quinone oxidoreductase subunit O
- UniProt
- Q8DMU4
- Pockets
- 1 · best druggability 0.33
Structure
1 distinct chain · 21% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NAD(P)H-quinone oxidoreductase subunit O | protein | 70 | 21% helix, 33% strand | Q8DMU4 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 63 | 0.33 | 0.75 | 12 | empty |
Compared structures
- 6NBX · T.elongatus NDH (data-set 2) · an experimental structure of the same protein · chain A against O, TM-score 0.86
- 6NBX · T.ELONGATUS ndh (data-set 2) · an experimental structure of the same protein · chain A against O, TM-score 0.86
- 6NBY · T.ELONGATUS ndh (composite model) · an experimental structure of the same protein · chain A against O, TM-score 0.86
- 6KHJ · Supercomplex for electron transfer · an experimental structure of the same protein · chain A against O, TM-score 0.86
- 6KHJ · Supercomplex for electron transfer · an experimental structure of the same protein · chain A against O, TM-score 0.86
- 6NBQ · T.ELONGATUS ndh (data-set 1) · an experimental structure of the same protein · chain A against O, TM-score 0.86
- 6KHI · Supercomplex for cylic electron transport in cyanobacteria · an experimental structure of the same protein · chain A against O, TM-score 0.84
- 6L7O · Cryo-EM structure of cyanobacteria fd-ndh-1L complex · an experimental structure of the same protein · chain A against O, TM-score 0.84
- 6TJV · Structure of the NDH-1MS complex from Thermosynechococcus elongatus · an experimental structure of the same protein · chain A against O, TM-score 0.83
- 6TJV · Structure of the ndh-1MS complex from thermosynechococcus elongatus · an experimental structure of the same protein · chain A against O, TM-score 0.83
- 6L7P · Cryo-EM structure of cyanobacteria ndh-1LDELV complex · an experimental structure of the same protein · chain A against O, TM-score 0.82
- 6HUM · Structure of the photosynthetic complex I from thermosynechococcus elongatus · an experimental structure of the same protein · chain A against O, TM-score 0.73
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8DMU4
- Elsewhere: UniProt Q8DMU4 · AlphaFold DB Q8DMU4
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