Research workbench

Dengue virus NS2B-NS3 protease A125C variant at pH 8.5

Analyse Dengue virus NS2B-NS3 protease A125C variant at pH 8.5 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4M9F
Type: protein
Length: 200 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: NS2B-NS3 protease
UniProt: Q91H74
Pockets: 1 · best druggability 0.36

Structure

x-ray diffraction · 1 distinct chain · 7% helix, 42% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	NS2B-NS3 protease	protein	200	7% helix, 42% strand	Q91H74

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	72	0.36	0.77	20	empty

Compared structures

4M9F · Dengue virus NS2B-NS3 protease A125C variant at pH 8.5 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q91H74
Elsewhere: RCSB PDB 4M9F · PDBe 4M9F · UniProt Q91H74

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