Research workbench
Crystal structure of a bacterial immunoglobulin-like domain from the M. primoryensis ice-binding adhesin
Analyse Crystal structure of a bacterial immunoglobulin-like domain from the M.… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4KDV
- Type
- protein
- Length
- 102 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Antifreeze protein
- UniProt
- A1YIY3
- Ligands
- CA
Structure
x-ray diffraction · 1 distinct chain · 10% helix, 53% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Antifreeze protein | protein | 102 | 10% helix, 53% strand | A1YIY3 |
Ligands and binding sites
- CA · Calcium ion · metal · 5 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 4KDV · Crystal structure of a bacterial immunoglobulin-like domain from the M. primoryensis… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1YIY3
- Elsewhere: RCSB PDB 4KDV · PDBe 4KDV · UniProt A1YIY3
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