Research workbench
Room temperature crystal structure flavodoxin D. vulgaris mutant Y98H at 2.0 ang. resolution
Analyse Room temperature crystal structure flavodoxin D. vulgaris mutant Y98H at 2.0… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1I1O
- Type
- protein
- Length
- 147 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Flavodoxin
- UniProt
- P00323
- Ligands
- FMN
- Pockets
- 1 · best druggability 0.40
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Flavodoxin | protein | 147 | 37% helix, 25% strand | P00323 |
Ligands and binding sites
- FMN · Flavin mononucleotide · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 97 | 0.40 | 0.77 | 25 | FMN |
Compared structures
- 1I1O · Room temperature crystal structure flavodoxin D. vulgaris mutant Y98H at 2.0 ang.… · the same entry in another collection · chain A against A, TM-score 1.00
- P00323 · AlphaFold monomer V2.0 prediction for flavodoxin (P00323) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00323
- Elsewhere: RCSB PDB 1I1O · PDBe 1I1O · UniProt P00323
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