Research workbench
Macrolepiota procera ricin B-like lectin (mpl) in complex with di- lacnac
Analyse Macrolepiota procera ricin B-like lectin (mpl) in complex with di- lacnac in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4J2S
- Type
- protein
- Length
- 139 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ricin B-like lectin
- UniProt
- F6KMV5
- Ligands
- BEN, MAG, GAL
Structure
x-ray diffraction · 1 distinct chain · 7% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ricin B-like lectin | protein | 139 | 7% helix, 42% strand | F6KMV5 |
Ligands and binding sites
- BEN · Benzamidine · ligand · chains A
- MAG · methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside · sugar · chains A
- GAL · beta-D-galactopyranose · sugar · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 4J2S · Macrolepiota procera ricin B-like lectin (MPL) in complex with Di-LacNAc · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F6KMV5
- Elsewhere: RCSB PDB 4J2S · PDBe 4J2S · UniProt F6KMV5
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