Research workbench
GCN4PLI derivative with ALPHA/BETA/ACYCLIC-gamma amino acid substitution pattern
Analyse GCN4PLI derivative with ALPHA/BETA/ACYCLIC-gamma amino acid substitution pattern in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4HJD
- Type
- protein
- Length
- 62 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- GCN4PLI(ALPHA/BETA/ACYCLIC gamma)
- Ligands
- ACE, 0W6
Structure
x-ray diffraction · 1 distinct chain · 87% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | GCN4PLI(ALPHA/BETA/ACYCLIC gamma) | protein | 31 | 87% helix, 0% strand | — |
Ligands and binding sites
- ACE · Acetyl group · ligand · 2 copies · chains A, B
- 0W6 · (4S)-4-aminopentanoic acid · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 900 Ų buried · 7 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 6 covalent, 4 modified (covalent ligand, nonstandard).
Compared structures
- 4HJD · GCN4pLI derivative with alpha/beta/acyclic-gamma amino acid substitution pattern · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4HJD · PDBe 4HJD
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