GL1X · GenesisL1 explorer

Ligand · 0W6

0W6 · (4S)-4-aminopentanoic acid

0W6, (4S)-4-aminopentanoic acid (C5 H11 N O2, 117.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with…

Component
0W6
Formula
C5 H11 N O2
Class
ligand
Structures
3
PDB entries
3

Binding sites

0W6 in 3 structures; the first of them:

  • 4FZC · 20S yeast proteasome in complex with cepafungin I · 0W6 c4 · binds THR1, ARG19, LYS33, GLY45, ALA46, GLY47, ALA49, SER129 and 2 more
  • 4FZG · 20S yeast proteasome in complex with glidobactin · 0W6 c4 · binds THR1, ARG19, LYS33, GLY45, ALA46, GLY47, ALA49, SER129 and 2 more
  • 4HJD · GCN4PLI derivative with ALPHA/BETA/ACYCLIC-gamma amino acid substitution pattern · 0W6 A18 · binds LEU14, XCP15, LYS16, LEU17, ILE19, GLU20, XCP21, GLU22 and 1 more

Residues it binds most

THR 8, GLY 8, ALA 8, LYS 10, LYO 8, ARG 6, GLU 2, LEU 2, MET 4, SER 4 (residue and the binding sites it lines).

Found with

  • 0W5 · (2E,4E)-11-methyldodeca-2,4-dienoic acid
  • ACE · Acetyl group
  • MH9 · (2E,4E)-dodeca-2,4-dienoic acid

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