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Crystal structure of haloalkane dehalogenase linb I253M mutant from sphingobium sp. MI1205
Analyse Crystal structure of haloalkane dehalogenase linb I253M mutant from sphingobium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4H7K
- Type
- protein
- Length
- 294 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Haloalkane dehalogenase
- UniProt
- A4PEU6
- Ligands
- CA, CL
- Pockets
- 2 · best druggability 0.75
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Haloalkane dehalogenase | protein | 294 | 43% helix, 20% strand | A4PEU6 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 70 | 0.75 | 0.98 | 18 | CL |
| 2 | 58 | 0.33 | 0.77 | 15 | empty |
Compared structures
- 4H7K · Crystal structure of haloalkane dehalogenase LinB I253M mutant from Sphingobium sp. MI1205 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4PEU6
- Elsewhere: RCSB PDB 4H7K · PDBe 4H7K · UniProt A4PEU6
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