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Crystal structure of S. aureus murb

Analyse Crystal structure of S. aureus murb in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1HSK
Type
protein
Length
303 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Udp-N-acetylenolpyruvoylglucosamine reductase
EC
1.1.1.158
UniProt
P61431
Ligands
FAD
Pockets
2 · best druggability 0.79

Structure

x-ray diffraction · 1 distinct chain · 33% helix, 27% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AUdp-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)protein30333% helix, 27% strandP61431

Ligands and binding sites

  • FAD · Flavin-adenine dinucleotide · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
16900.790.8462FAD
2500.270.7416empty

Compared structures

  • 1HSK · Crystal structure of S. aureus murb · the same entry in another collection · chain A against A, TM-score 1.00
  • P61431 · AlphaFold monomer V2.0 prediction for udp-N- acetylenolpyruvoylglucosamine reductase… · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

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