Research workbench

The crystal structure of a human mitoneet mutant with met 62 replaced by a gly

Analyse The crystal structure of a human mitoneet mutant with met 62 replaced by a gly in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4F28
Type: protein
Length: 127 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cdgsh iron-sulfur domain-containing protein 1
UniProt: Q9NZ45
Ligands: FES

Structure

x-ray diffraction · 2 distinct chains · 19% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cdgsh iron-sulfur domain-containing protein 1	protein	63	19% helix, 25% strand	Q9NZ45
B	Cdgsh iron-sulfur domain-containing protein 1	protein	64	19% helix, 27% strand	Q9NZ45

Ligands and binding sites

FES · Fe2/s2 (inorganic) cluster · ligand · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 1678 Å² buried · 41 hydrogen bonds · protein-protein

Compared structures

4F28 · The Crystal Structure of a Human MitoNEET mutant with Met 62 Replaced by a Gly · the same entry in another collection · chain A against A, TM-score 1.00
Q9NZ45 · AlphaFold monomer V2.0 prediction for cdgsh iron-sulfur domain- containing protein 1… · a predicted model of the same protein · chain B against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9NZ45
Elsewhere: RCSB PDB 4F28 · PDBe 4F28 · UniProt Q9NZ45

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.