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Crystal structure of a putative iron-regulated protein a precursor (BDI_2603) from parabacteroides distasonis atcc 8503 at 2.30 a resolution

Analyse Crystal structure of a putative iron-regulated protein a precursor (BDI_2603)… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4ECG
Type: protein
Length: 368 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative iron-regulated protein a
UniProt: A6LF58
Ligands: CA, CL
Pockets: 2 · best druggability 0.46

Structure

x-ray diffraction · 1 distinct chain · 65% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative iron-regulated protein a	protein	368	65% helix, 2% strand	A6LF58

Ligands and binding sites

CA · Calcium ion · metal · 9 copies · chains A
CL · Chloride ion · ion · chains A
1PE · Pentaethylene glycol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	166	0.46	0.76	26	CA
2	138	0.44	0.76	23	1PE

Modifications

Observed in the structure: 10 modified (engineered).

Compared structures

4ECG · Crystal structure of a putative iron-regulated protein A precursor (BDI_2603) from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A6LF58
Elsewhere: RCSB PDB 4ECG · PDBe 4ECG · UniProt A6LF58

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