Research workbench
Chimeric GST containing inserts of kininogen peptides
Analyse Chimeric GST containing inserts of kininogen peptides in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4ECB
- Type
- protein
- Length
- 401 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Chimeric protein between GSHKT10 and domain 5 of kininogen- 1
- EC
- 2.5.1.18
- UniProt
- P08515, P01042
- Pockets
- 3 · best druggability 0.73
Structure
x-ray diffraction · 2 distinct chains · 53% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Chimeric protein between GSHKT10 and domain 5 of kininogen- 1 (EC 2.5.1.18) | protein | 202 | 53% helix, 9% strand | P08515, P01042 |
| B | Chimeric protein between GSHKT10 and domain 5 of kininogen- 1 (EC 2.5.1.18) | protein | 199 | 52% helix, 9% strand | P08515, P01042 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 703 | 0.73 | 0.79 | 70 | empty |
| 2 | 58 | 0.33 | 0.77 | 13 | empty |
| 3 | 53 | 0.30 | 0.76 | 9 | empty |
Interfaces
1 interface between chains.
- A–B · 992 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
- 4ECB · Chimeric GST Containing Inserts of Kininogen Peptides · the same entry in another collection · chain A against A, TM-score 1.00
- P08515 · AlphaFold monomer V2.0 prediction for glutathione S-transferase class-mu 26 kda isozyme… · a predicted model of the same protein · chain B against A, TM-score 0.99
- P01042 · AlphaFold monomer V2.0 prediction for kininogen-1 (P01042) · a predicted model of the same protein · chain B against A, TM-score 0.30
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08515
- Every structure of UniProt P01042
- Elsewhere: RCSB PDB 4ECB · PDBe 4ECB · UniProt P08515 · UniProt P01042
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