Research workbench
Crystal structure of the yeast LSM1-7-PAT1 complex
Analyse Crystal structure of the yeast LSM1-7-PAT1 complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4C8Q
- Type
- protein
- Length
- 866 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P47017, P38203, P57743, P40070, P40089, Q06406, P53905, P25644
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 94 | — | P47017 |
| B | — | protein | 104 | — | P38203 |
| C | — | protein | 79 | — | P57743 |
| D | — | protein | 81 | — | P40070 |
| E | — | protein | 83 | — | P40089 |
| F | — | protein | 77 | — | Q06406 |
| G | — | protein | 69 | — | P53905 |
| H | — | protein | 279 | — | P25644 |
Compared structures
- 4C8Q · Crystal structure of the yeast Lsm1-7-Pat1 complex · the same entry in another collection · chain H against H, TM-score 1.00
- P25644 · AlphaFold monomer V2.0 prediction for DNA topoisomerase 2-associated protein PAT1 (P25644) · a predicted model of the same protein · chain H against A, TM-score 0.97
- P40089 · AlphaFold monomer V2.0 prediction for U6 snrna-associated sm-like protein LSM5 (P40089) · a predicted model of the same protein · chain E against A, TM-score 0.96
- P57743 · AlphaFold monomer V2.0 prediction for U6 snrna-associated sm-like protein LSM3 (P57743) · a predicted model of the same protein · chain C against A, TM-score 0.95
- P47017 · AlphaFold monomer V2.0 prediction for sm-like protein LSM1 (P47017) · a predicted model of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P47017
- Every structure of UniProt P38203
- Every structure of UniProt P57743
- Every structure of UniProt P40070
- Every structure of UniProt P40089
- Every structure of UniProt Q06406
- Every structure of UniProt P53905
- Every structure of UniProt P25644
- Elsewhere: RCSB PDB 4C8Q · PDBe 4C8Q · UniProt P47017 · UniProt P38203 · UniProt P57743 · UniProt P40070 · UniProt P40089 · UniProt Q06406 · UniProt P53905 · UniProt P25644
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