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Crystal structure of fungal versatile peroxidase I from pleurotus ostreatus - crystal form II

Analyse Crystal structure of fungal versatile peroxidase I from pleurotus ostreatus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4BLL
Type: protein
Length: 318 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Versatile peroxidase I
EC: 1.11.1.16
Ligands: HEM, ZN, CA
Pockets: 1 · best druggability 0.79

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 7% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Versatile peroxidase I (EC 1.11.1.16)	protein	318	42% helix, 7% strand	—

Ligands and binding sites

HEM · Protoporphyrin IX containing Fe · ligand · chains A
ZN · Zinc ion · metal · 3 copies · chains A
CA · Calcium ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	367	0.79	0.88	43	HEM

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

4BLL · Crystal Structure of Fungal Versatile Peroxidase I from Pleurotus ostreatus - Crystal… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 4BLL · PDBe 4BLL

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