Research workbench
Crystal structure of copper nitrite reductase from geobacillus kaustophilus
Analyse Crystal structure of copper nitrite reductase from geobacillus kaustophilus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3WI9
- Type
- protein
- Length
- 303 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nitrite reductase
- EC
- 1.7.2.1
- UniProt
- Q5L1X8
- Ligands
- ZN, CU, NA, SO4
Structure
x-ray diffraction · 1 distinct chain · 13% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nitrite reductase (EC 1.7.2.1) | protein | 303 | 13% helix, 47% strand | Q5L1X8 |
Ligands and binding sites
- ZN · Zinc ion · metal · 3 copies · chains A
- CU · Copper (II) ion · metal · 2 copies · chains A
- NA · Sodium ion · metal · 2 copies · chains A
- SO4 · Sulfate ion · ion · chains A
- ACY · Acetic acid · additive · chains A
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 3WI9 · Crystal structure of copper nitrite reductase from Geobacillus kaustophilus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5L1X8
- Elsewhere: RCSB PDB 3WI9 · PDBe 3WI9 · UniProt Q5L1X8
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