Research workbench

Crystal structure of alternaria alternata allergen alt a 1

Analyse Crystal structure of alternaria alternata allergen alt a 1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3V0R
Type: protein
Length: 130 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Major allergen alt a 1
UniProt: P79085
Ligands: 0FU, 8AC, SO4, UNX

Structure

x-ray diffraction · 1 distinct chain · 2% helix, 48% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Major allergen alt a 1	protein	130	2% helix, 48% strand	P79085

Ligands and binding sites

0FU · 2,5,6-triaminopyrimidin-4-ol · ligand · 3 copies · chains A
8AC · 8-aminooctanoic acid · ligand · chains A
SO4 · Sulfate ion · ion · 4 copies · chains A
UNX · Unknown atom or ion · ion · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

3V0R · Crystal structure of Alternaria alternata allergen Alt a 1 · the same entry in another collection · chain A against A, TM-score 1.00
P79085 · AlphaFold monomer V2.0 prediction for major allergen alt a 1 (P79085) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P79085
Elsewhere: RCSB PDB 3V0R · PDBe 3V0R · UniProt P79085

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.