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Ligand · 8AC

8AC · 8-aminooctanoic acid

8AC, 8-aminooctanoic acid (C8 H17 N O2, 159.2 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
8AC
Formula
C8 H17 N O2
Class
ligand
Structures
8
PDB entries
4

Binding sites

8AC in 8 structures; the first of them:

  • 3MLE · Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori… · 8AC A225 · binds LEU150, GLY151, LEU152, ILE153, ASN154, THR9, THR39, SER79 and 4 more
  • 3QXH · Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed… · 8AC A221 · binds ASN8, THR9, THR39, VAL78, SER79, ALA80, GLY119, VAL123
  • 3QXX · Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed… · 8AC A221 · binds ASN8, THR9, THR39, VAL78, SER79, ALA80, GLY119, VAL123
  • 3V0R · Crystal structure of Alternaria alternata allergen Alt a 1 · 8AC A211 · binds ASP37, TYR38, TRP40, GLN110, TYR118, LEU150
  • 3MLE · Crystal structure of dethiobiotin synthetase (biod) from helicobacter pylori… · 8AC A225 · binds LEU150, GLY151, LEU152, ILE153, ASN154, THR9, THR39, SER79 and 4 more
  • 3QXH · Crystal structure of dethiobiotin synthetase (biod) from helicobacter pylori complexed… · 8AC A221 · binds ASN8, THR9, THR39, VAL78, SER79, ALA80, GLY119, VAL123
  • 3QXX · Crystal structure of dethiobiotin synthetase (biod) from helicobacter pylori complexed… · 8AC A221 · binds ASN8, THR9, THR39, VAL78, SER79, ALA80, GLY119, VAL123
  • 3V0R · Crystal structure of alternaria alternata allergen alt a 1 · 8AC A211 · binds ASP37, TYR38, TRP40, GLN110, TYR118, LEU150

Residues it binds most

GLY 16, THR 16, VAL 16, LEU 14, ALA 16, ASN 16, SER 16, ILE 12, TYR 2, ASP 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • PO4 · Phosphate ion
  • ADP · Adenosine-5'-diphosphate
  • EDO · 1,2-ethanediol
  • 0FU · 2,5,6-triaminopyrimidin-4-ol
  • GDP · Guanosine-5'-diphosphate
  • CL · Chloride ion
  • NO3 · Nitrate ion
  • SO4 · Sulfate ion
  • UNX · Unknown atom or ion
  • GOL · Glycerol

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