Research workbench
Bond length analysis of asp, glu and his residues in subtilisin carlsberg at 1.26A resolution
Analyse Bond length analysis of asp, glu and his residues in subtilisin carlsberg at… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3UNX
- Type
- protein
- Length
- 274 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Subtilisin carlsberg
- EC
- 3.4.21.62
- UniProt
- P00780
- Ligands
- CA, NA
- Pockets
- 1 · best druggability 0.38
Structure
x-ray diffraction · 1 distinct chain · 30% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Subtilisin carlsberg (EC 3.4.21.62) | protein | 274 | 30% helix, 20% strand | P00780 |
Ligands and binding sites
- CA · Calcium ion · metal · 2 copies · chains A
- NA · Sodium ion · metal · chains A
- GOL · Glycerol · additive · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 105 | 0.38 | 0.75 | 34 | GOL |
Compared structures
- 3UNX · Bond length analysis of asp, glu and his residues in subtilisin Carlsberg at 1.26A… · the same entry in another collection · chain A against A, TM-score 1.00
- P00780 · AlphaFold monomer V2.0 prediction for subtilisin carlsberg (P00780) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00780
- Elsewhere: RCSB PDB 3UNX · PDBe 3UNX · UniProt P00780
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